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国家自然科学基金(21290193)

作品数:3 被引量:2H指数:1
相关作者:马会利梁万珍更多>>
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发文基金:国家自然科学基金国家重点基础研究发展计划福建省自然科学基金更多>>
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几个荧光蛋白发色团双光子吸收性质的理论研究(英文)被引量:1
2016年
实验测得的荧光蛋白的单、双光子吸收光谱在低频和高频区域都表现出明显不同的特征。为了揭示这些不同点的起源和研究荧光蛋白的构–效关系,我们详细研究了三种荧光蛋白发色团(一种增强型蓝绿色荧光蛋白的中性发色团和两种红色荧光蛋白的阴离子发色团)的单、双光子吸收特性,分别计算了纯的和振动分辨的电子谱。计算结果表明:光谱线形与计算采用的交换相关密度泛函及谱截面计算所采用的近似关系密切;如果在计算光谱截面时,我们利用长程修正的交换相关泛函CAM-B3LYP来计算几何和电子结构参数,然后把Franck-Condon(FC)效应和包含Herzberg-Teller(HT)效果的电-声耦合效应都考虑进去,理论计算的光谱与实验测定的光谱可以很好地符合;对于两种离子态的发色团,HT电-声耦合效应使得对应于基态到第一激发态跃迁的双光子吸收最强峰相对于单光子吸收的最强峰发生了蓝移,但HT电-声耦合效应对高频的双光子吸收谱没有太大的影响;分子内电荷转移是导致高频区的双光子吸收明显强于单光子吸收的主要原因。
叶传香马会利梁万珍
关键词:双光子吸收振动光谱含时密度泛函理论
VBEFP/PCM: a QM/MM/PCM approach for valence-bond method and its application for the vertical excitations of formaldehyde and acetone in aqueous solution
2014年
In this paper, a combined QM/MM/PCM approach, named VBEFP/PCM, is presented for ab initio VB study with a solvent effect incorporated. In VBEFP/PCM, both short-range and long-range solvent effects are taken into account by effective fragment potential(EFP) and polarizable continuum model(PCM), respectively, while the solute molecules are described by valence bond(VB) wave function. Furthermore, VBEFP/PCM, along with VBPCM and VBEFP, is employed for the n??* vertical excitation of formaldehyde and acetone molecules in aqueous solution. The computational results show that VBEFP/PCM can provide the appropriate solvent shifts, whereas VBPCM underestimates the solvent shifts due to its lack of short-range solvent effect. The VBEFP results strongly rely upon the description of the short-range solvent effect. To explore the role of the solute's electronic structure in the solvent shift, resonance energy analysis during the excitation is performed. It was found that the solute's electronic polarization plays the most important role in the solvent shift. The ? resonance controls the variation of the solute's wave function during the n→?* vertical excitation, which leads to the blue solvent shifts.
HUANG JingYING FuMingSU PeiFengWU Wei
Analytical derivative techniques for TDDFT excited-state properties:Theory and application被引量:1
2014年
We review our recent work on the methodology development of the excited-state properties for the molecules in vacuum and liquid solution.The general algorithms of analytical energy derivatives for the specific properties such as the first and second geometrical derivatives and IR/Raman intensities are demonstrated in the framework of the time-dependent density functional theory(TDDFT).The performance of the analytical approaches on the calculation of excited-state energy Hessian has also been shown.It is found that the analytical approaches are superior to the finite-difference method on the computational accuracy and efficiency.The computational cost for a TDDFT excited-state Hessian calculation is only 2–3 times as that for the DFT ground-state Hessian calculation.With the low computational complexity of the developed analytical approaches,it becomes feasible to realize the large-scale numerical calculations on the excited-state vibrational frequencies,vibrational spectroscopies and the electronic-structure parameters which enter the spectrum calculations of electronic absorption and emission,and resonance Raman spectroscopies for medium-to large-sized systems.
CHEN DanPingLIU JieMA HuiLiZENG QiaoLIANG WanZhen
关键词:MOLECULAREXCITED-STATE
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